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Computational Linguistics Research at Simmons College

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CREU Weeks 11 & 12 – Rebecca

haralson • December 8, 2015

After having Thanksgiving break, we decided to lay out our game plan for the rest of the semester. I will continue looking into discrepancies between medical records. Specifically, I'm looking into patients' smoking statuses. It's common for one record to …

Posted in Clinical Narratives. Tags: CREU, rebecca on December 8, 2015 by haralson.

Weeks 9 & 10 – Katie

sittig • November 23, 2015

We have a server! We spent our most recent meeting figuring out who has access to which parts of it and other things like that. The next step is to learn how to navigate the server; I lucked out and …

Posted in Clinical Narratives. Tags: CREU, katie on November 23, 2015 by sittig.

CREU Weeks 9 & 10 – Rebecca

haralson • November 18, 2015

Our server is finally working! I've been learning how to use the command lineĀ and how to SSH into the server. Having remote access will be especially useful for me, since I live off campus. Yay!

We also did some …

Posted in Clinical Narratives. Tags: CREU, rebecca on November 18, 2015 by haralson.

Weeks 7 & 8 – Katie

sittig • November 12, 2015

It's been tricky to get a server instantiated to keep all of our data in one place, but we're working on it! In the meantime, I read some papers related to our project, including one that Professor Stubbs worked on, …

Posted in Clinical Narratives. Tags: CREU, katie on November 12, 2015 by sittig.

CREU Group Update

haralson • November 2, 2015

This week, we've worked on finalizing our person and patient objects. After a few weeks of writing the separate parts of this program, we've finally brought them all together into a cohesive whole. The code will now read in the …

Posted in Clinical Narratives. Tags: CREU on November 2, 2015 by haralson.

10/23/15

worobey • November 2, 2015

This week we split up the work among the three of us. I focused on writing a code that read in a CSV file of patient information. Later I will be using this file and file reader and applying statistical …

Posted in Clinical Narratives. Tags: CREU on November 2, 2015 by worobey.

10/16/2015

worobey • November 2, 2015

This week Rebecca and I worked together on creating person and patient objects in python. It had been a while since I had done this in python, so I took some time getting familiarized with how to do this. Our …

Posted in Clinical Narratives, Uncategorized. Tags: CREU on November 2, 2015 by worobey.

Rebecca’s CREU Update! 10/27/15

haralson • October 27, 2015

This week, we worked on finishing up our person and patient classes. I also created separate objects for each tag category - for example, family history and medication. At first we were reading in these tags as strings. Now we …

Posted in Clinical Narratives. Tags: CREU, rebecca on October 27, 2015 by haralson.

Weeks 5 & 6 – Katie

sittig • October 23, 2015

I was fortunate enough to attend the Grace Hopper Celebration recently, so I was unable to make our most recent meeting. However, I did program quite a bit on the plane (I had a lot of layovers). Regular expressions are …

Posted in Clinical Narratives. Tags: CREU, katie on October 23, 2015 by sittig.

Week 4 – Katie

sittig • October 23, 2015

Stephanie, Rebecca, and I have started discussing how we're going to integrate all of our code, since we have all begun working on parsers, Patient classes, and so on. I did some more background reading as well.

Lately we've been …

Posted in Clinical Narratives. Tags: CREU, katie on October 23, 2015 by sittig.

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  • Stephanie Worobey – week 25 to the end May 2, 2016
  • Stephanie Worobey – week 24 May 2, 2016
  • Stephanie Worobey – week 23 May 2, 2016
  • The final weeks! May 1, 2016
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